Dyslexia-associated protein

Protein and coding gene in humans
KIAA0319
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

2E7M

Identifiers
AliasesKIAA0319, DYLX2, DYX2, NMIG, AAVR
External IDsOMIM: 609269; MGI: 3036268; HomoloGene: 8878; GeneCards: KIAA0319; OMA:KIAA0319 - orthologs
Gene location (Human)
Chromosome 6 (human)
Chr.Chromosome 6 (human)[1]
Chromosome 6 (human)
Genomic location for KIAA0319
Genomic location for KIAA0319
Band6p22.3Start24,544,104 bp[1]
End24,646,191 bp[1]
Gene location (Mouse)
Chromosome 13 (mouse)
Chr.Chromosome 13 (mouse)[2]
Chromosome 13 (mouse)
Genomic location for KIAA0319
Genomic location for KIAA0319
Band13|13 A3.1Start25,029,118 bp[2]
End25,085,253 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • middle temporal gyrus

  • Brodmann area 23

  • gonad

  • primary visual cortex

  • endothelial cell

  • entorhinal cortex

  • Brodmann area 9

  • superior frontal gyrus

  • prefrontal cortex

  • lateral nuclear group of thalamus
Top expressed in
  • lumbar spinal ganglion

  • ventromedial nucleus

  • olfactory epithelium

  • lateral septal nucleus

  • primary motor cortex

  • paraventricular nucleus of hypothalamus

  • mammillary body

  • lateral hypothalamus

  • prefrontal cortex

  • cingulate gyrus
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • protein binding
Cellular component
  • integral component of membrane
  • endosome
  • early endosome
  • early endosome membrane
  • membrane
  • plasma membrane
  • clathrin-coated vesicle membrane
  • intracellular membrane-bounded organelle
  • cytoplasmic vesicle
Biological process
  • multicellular organism development
  • neuron migration
  • nervous system development
  • negative regulation of dendrite development
  • membrane organization
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

9856

210108

Ensembl

ENSG00000137261

ENSMUSG00000006711

UniProt

Q5VV43

Q5SZV5

RefSeq (mRNA)
NM_001168374
NM_001168375
NM_001168376
NM_001168377
NM_001252328

NM_014809
NM_001350403
NM_001350404
NM_001350405
NM_001350406
NM_001350407
NM_001350408
NM_001350409
NM_001350410

NM_001081051

RefSeq (protein)
NP_001161846
NP_001161847
NP_001161848
NP_001161849
NP_001239257

NP_055624
NP_001337332
NP_001337333
NP_001337334
NP_001337335
NP_001337336
NP_001337337
NP_001337338
NP_001337339

NP_001074520

Location (UCSC)Chr 6: 24.54 – 24.65 MbChr 13: 25.03 – 25.09 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Dyslexia-associated protein KIAA0319 is a protein which in humans is encoded by the KIAA0319 gene.[5][6]

Clinical significance

Variants of the KIAA0319 gene have been associated with developmental dyslexia.[7][8] Reading disability, or dyslexia, is a major social, educational and mental health problem. In spite of average intelligence and adequate educational opportunities, 5 to 10% of school children have substantial reading deficits. Twin and family studies have shown a substantial genetic component to this disorder, with heritable variation estimated at 50 to 70%.[5]

Mutations in the gene also more generally appear to play a key role in specific language impairment (SLI).[9][10]

Function

Over-expression of C-terminally myc-tagged KIAA0319 protein in transiently transfected 293T cells, showing plasma membrane localization. Detection with monoclonal anti-myc 9E10.

The KIAA0319 protein is expressed on the cell membrane and may be involved in neuronal migration. Furthermore, KIAA0319 follows a clathrin-mediated endocytic pathway.[11]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000137261 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000006711 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ a b "Entrez Gene: KIAA0319 KIAA0319".
  6. ^ Nagase T, Ishikawa K, Nakajima D, Ohira M, Seki N, Miyajima N, Tanaka A, Kotani H, Nomura N, Ohara O (April 1997). "Prediction of the coding sequences of unidentified human genes. VII. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro". DNA Research. 4 (2): 141–50. doi:10.1093/dnares/4.2.141. PMID 9205841.
  7. ^ Cope N, Harold D, Hill G, Moskvina V, Stevenson J, Holmans P, Owen MJ, O'Donovan MC, Williams J (April 2005). "Strong evidence that KIAA0319 on chromosome 6p is a susceptibility gene for developmental dyslexia". American Journal of Human Genetics. 76 (4): 581–91. doi:10.1086/429131. PMC 1199296. PMID 15717286.
  8. ^ Paracchini S, Thomas A, Castro S, Lai C, Paramasivam M, Wang Y, et al. (May 2006). "The chromosome 6p22 haplotype associated with dyslexia reduces the expression of KIAA0319, a novel gene involved in neuronal migration". Human Molecular Genetics. 15 (10): 1659–66. doi:10.1093/hmg/ddl089. hdl:11858/00-001M-0000-0012-C979-F. PMID 16600991.
  9. ^ Rice ML, Smith SD, Gayán J (December 2009). "Convergent genetic linkage and associations to language, speech and reading measures in families of probands with Specific Language Impairment". Journal of Neurodevelopmental Disorders. 1 (4): 264–82. doi:10.1007/s11689-009-9031-x. PMC 2788915. PMID 19997522.
  10. ^ Gibson CJ, Gruen JR (2008). "The human lexinome: genes of language and reading". Journal of Communication Disorders. 41 (5): 409–20. doi:10.1016/j.jcomdis.2008.03.003. PMC 2488410. PMID 18466916.
  11. ^ Levecque C, Velayos-Baeza A, Holloway ZG, Monaco AP (July 2009). "The dyslexia-associated protein KIAA0319 interacts with adaptor protein 2 and follows the classical clathrin-mediated endocytosis pathway". American Journal of Physiology. Cell Physiology. 297 (1): C160-8. doi:10.1152/ajpcell.00630.2008. PMC 2711651. PMID 19419997.

Further reading

  • Ozçelik T, Porteus MH, Rubenstein JL, Francke U (August 1992). "DLX2 (TES1), a homeobox gene of the Distal-less family, assigned to conserved regions on human and mouse chromosomes 2". Genomics. 13 (4): 1157–61. doi:10.1016/0888-7543(92)90031-M. PMID 1354641.
  • Cardon LR, Smith SD, Fulker DW, Kimberling WJ, Pennington BF, DeFries JC (October 1994). "Quantitative trait locus for reading disability on chromosome 6". Science. 266 (5183): 276–9. Bibcode:1994Sci...266..276C. doi:10.1126/science.7939663. PMID 7939663.
  • Gayán J, Smith SD, Cherny SS, Cardon LR, Fulker DW, Brower AM, Olson RK, Pennington BF, DeFries JC (January 1999). "Quantitative-trait locus for specific language and reading deficits on chromosome 6p". American Journal of Human Genetics. 64 (1): 157–64. doi:10.1086/302191. PMC 1377713. PMID 9915954.
  • Nakayama M, Kikuno R, Ohara O (November 2002). "Protein-protein interactions between large proteins: two-hybrid screening using a functionally classified library composed of long cDNAs". Genome Research. 12 (11): 1773–84. doi:10.1101/gr.406902. PMC 187542. PMID 12421765.
  • Londin ER, Meng H, Gruen JR (June 2003). "A transcription map of the 6p22.3 reading disability locus identifying candidate genes". BMC Genomics. 4 (1): 25. doi:10.1186/1471-2164-4-25. PMC 166143. PMID 12834540.
  • Francks C, Paracchini S, Smith SD, Richardson AJ, Scerri TS, Cardon LR, Marlow AJ, MacPhie IL, Walter J, Pennington BF, Fisher SE, Olson RK, DeFries JC, Stein JF, Monaco AP (December 2004). "A 77-kilobase region of chromosome 6p22.2 is associated with dyslexia in families from the United Kingdom and from the United States". American Journal of Human Genetics. 75 (6): 1046–58. doi:10.1086/426404. PMC 1182140. PMID 15514892.
  • Luciano M, Lind PA, Duffy DL, Castles A, Wright MJ, Montgomery GW, Martin NG, Bates TC (October 2007). "A haplotype spanning KIAA0319 and TTRAP is associated with normal variation in reading and spelling ability". Biological Psychiatry. 62 (7): 811–7. doi:10.1016/j.biopsych.2007.03.007. PMID 17597587. S2CID 11334660.
  • Velayos-Baeza A, Toma C, da Roza S, Paracchini S, Monaco AP (September 2007). "Alternative splicing in the dyslexia-associated gene KIAA0319". Mammalian Genome. 18 (9): 627–34. doi:10.1007/s00335-007-9051-3. PMID 17846832. S2CID 42549021.
  • KIAA0319 Associations, Experiments, Publications and Clinical Trials
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