KIAA0368

Protein-coding gene in the species Homo sapiens
ECPAS
Identifiers
AliasesECPAS, ECM29, Ecm29 proteasome adaptor and scaffold, KIAA0368
External IDsOMIM: 616694; MGI: 2140220; HomoloGene: 6056; GeneCards: ECPAS; OMA:ECPAS - orthologs
Gene location (Human)
Chromosome 9 (human)
Chr.Chromosome 9 (human)[1]
Chromosome 9 (human)
Genomic location for ECPAS
Genomic location for ECPAS
Band9q31.3Start111,360,685 bp[1]
End111,484,745 bp[1]
Gene location (Mouse)
Chromosome 4 (mouse)
Chr.Chromosome 4 (mouse)[2]
Chromosome 4 (mouse)
Genomic location for ECPAS
Genomic location for ECPAS
Band4|4 B3Start58,798,911 bp[2]
End58,912,749 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • gastrocnemius muscle

  • tendon of biceps brachii

  • buccal mucosa cell

  • muscle of thigh

  • glutes

  • Skeletal muscle tissue of rectus abdominis

  • Skeletal muscle tissue of biceps brachii

  • deltoid muscle

  • internal globus pallidus

  • endothelial cell
Top expressed in
  • muscle of thigh

  • plantaris muscle

  • aortic valve

  • extensor digitorum longus muscle

  • secondary oocyte

  • zygote

  • cardiac muscle tissue of left ventricle

  • primary oocyte

  • ascending aorta

  • quadriceps femoris muscle
More reference expression data
BioGPS




More reference expression data
Gene ontology
Molecular function
  • protein binding
  • molecular adaptor activity
  • proteasome binding
Cellular component
  • cytoplasm
  • multivesicular body
  • endosome
  • late endosome
  • centrosome
  • membrane
  • endocytic vesicle
  • microtubule organizing center
  • trans-Golgi network
  • early endosome
  • endoplasmic reticulum
  • proteasome complex
  • COPII-coated ER to Golgi transport vesicle
  • cytoskeleton
  • nucleus
  • endoplasmic reticulum-Golgi intermediate compartment
  • cytoplasmic vesicle
Biological process
  • ubiquitin-dependent ERAD pathway
  • proteasome assembly
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

23392

230249

Ensembl

ENSG00000136813

ENSMUSG00000050812

UniProt

Q5VYK3

Q6PDI5

RefSeq (mRNA)

NM_001080398
NM_001363756
NM_001364929
NM_001364930
NM_001364931

NM_172381
NM_001355696
NM_001355697

RefSeq (protein)

NP_001073867
NP_001350685
NP_001351858
NP_001351859
NP_001351860

NP_759013
NP_001342625
NP_001342626

Location (UCSC)Chr 9: 111.36 – 111.48 MbChr 4: 58.8 – 58.91 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Proteasome-associated protein ECM29 homolog is a protein that in humans is encoded by the KIAA0368 gene.[5][6][7]


References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000136813 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000050812 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Nagase T, Ishikawa K, Nakajima D, Ohira M, Seki N, Miyajima N, Tanaka A, Kotani H, Nomura N, Ohara O (Sep 1997). "Prediction of the coding sequences of unidentified human genes. VII. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro". DNA Res. 4 (2): 141–50. doi:10.1093/dnares/4.2.141. PMID 9205841.
  6. ^ Gorbea C, Goellner GM, Teter K, Holmes RK, Rechsteiner M (Dec 2004). "Characterization of mammalian Ecm29, a 26 S proteasome-associated protein that localizes to the nucleus and membrane vesicles". J Biol Chem. 279 (52): 54849–61. doi:10.1074/jbc.M410444200. PMID 15496406.
  7. ^ "Entrez Gene: KIAA0368 KIAA0368".

Further reading

  • Andersson B, Wentland MA, Ricafrente JY, et al. (1996). "A "double adaptor" method for improved shotgun library construction". Anal. Biochem. 236 (1): 107–13. doi:10.1006/abio.1996.0138. PMID 8619474.
  • Yu W, Andersson B, Worley KC, et al. (1997). "Large-Scale Concatenation cDNA Sequencing". Genome Res. 7 (4): 353–8. doi:10.1101/gr.7.4.353. PMC 139146. PMID 9110174.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
  • Bouwmeester T, Bauch A, Ruffner H, et al. (2004). "A physical and functional map of the human TNF-alpha/NF-kappa B signal transduction pathway". Nat. Cell Biol. 6 (2): 97–105. doi:10.1038/ncb1086. PMID 14743216. S2CID 11683986.
  • Humphray SJ, Oliver K, Hunt AR, et al. (2004). "DNA sequence and analysis of human chromosome 9". Nature. 429 (6990): 369–74. Bibcode:2004Natur.429..369H. doi:10.1038/nature02465. PMC 2734081. PMID 15164053.
  • Beausoleil SA, Jedrychowski M, Schwartz D, et al. (2004). "Large-scale characterization of HeLa cell nuclear phosphoproteins". Proc. Natl. Acad. Sci. U.S.A. 101 (33): 12130–5. Bibcode:2004PNAS..10112130B. doi:10.1073/pnas.0404720101. PMC 514446. PMID 15302935.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • Rual JF, Venkatesan K, Hao T, et al. (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. Bibcode:2005Natur.437.1173R. doi:10.1038/nature04209. PMID 16189514. S2CID 4427026.
  • Ewing RM, Chu P, Elisma F, et al. (2007). "Large-scale mapping of human protein–protein interactions by mass spectrometry". Mol. Syst. Biol. 3 (1): 89. doi:10.1038/msb4100134. PMC 1847948. PMID 17353931.


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