| B3GAT2 |
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| Available structures |
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| PDB | Pretraga ortologa: PDBe RCSB |
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| Identifikatori |
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| Alijasi | B3GAT2 |
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| Spoljašnji ID | OMIM: 607497 MGI: 2389490 HomoloGene: 50574 GeneCards: B3GAT2 |
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| Genska lokacija (miš) |
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 | | Hr. | Chromosome 1 (mouse)[1] |
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| | Band | 1|1 A5 | Start | 23,800,834 bp[1] |
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| Kraj | 23,888,239 bp[1] |
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| Genska ontologija |
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| Molecular function | • transferase activity
• metal ion binding
• galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity
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| Cellular component | • саставни део мембране
• Голџијев апарат
• мембрана
• Golgi membrane
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| Biological process | • glycosaminoglycan metabolic process
• GO:0033578, GO:0033577, GO:0033575, GO:0033576 protein glycosylation
• chondroitin sulfate proteoglycan biosynthetic process
• chondroitin sulfate metabolic process
• Метаболизам угљених хидрата
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| Sources:Amigo / QuickGO |
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| Ortolozi |
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| Vrste | Čovek | Miš |
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| Entrez | | |
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| Ensembl | | |
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| UniProt | | |
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| RefSeq (mRNA) | | |
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| RefSeq (protein) | | |
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| Location (UCSC) | n/a | Chr 1: 23.8 – 23.89 Mb |
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| PubMed search | [2] | [3] |
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| Wikidata |
| View/Edit Human | View/Edit Mouse |
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Galaktozilgalaktozilksilozilprotein 3-beta-glukuronoziltransferaza 2 je enzim koji je kod ljudi kodiran genom B3GAT2.[4][5]
Produkt ovog gena je transmembranski protein koji pripada porodici glukuroniltransferaza i katalizuje prenos beta-1,3 povezane glukuronske kiseline na terminalnu galaktozu u različitim glikoproteinima ili glikolipidima koji sadrže Gal-beta-1-4GlcNAc ili Gal-beta-1-3GlcNAc ostatak. Kodirani protein uključen je u sintezu ugljenohidratnog epitopa ljudskog prirodnog ubice-1 (HNK-1), sulfatiranog trisaharida uključenog u ćelijsku migraciju i adheziju u nervnom sistemu.[5]
Upotreba antitela HNK-1 za istraživanje neuralnog grebena
Antitela podignuta protiv epitopa HNK-1 odigrala su veliku ulogu u studijama nervnog grebena, posebno kod ptičijeg embriona.[6] Prvo antitelo razvijeno protiv ovog epitopa bilo je NC-1,[7] koje je omogućilo mnogo lakše analize puteva migracije nervnog grebena. Kod ptica, a posebno kod drugih kičmenjaka, rezultate HNK-1 bojenja treba tumačiti sa oprezom jer epitop nije jedinstven za neuralni greben.
Reference
- ^ а б в GRCm38: Ensembl release 89: ENSMUSG00000026156 - Ensembl, May 2017
- ^ „Human PubMed Reference:”. National Center for Biotechnology Information, U.S. National Library of Medicine.
- ^ „Mouse PubMed Reference:”. National Center for Biotechnology Information, U.S. National Library of Medicine.
- ^ Imiya K, Ishizaki T, Seiki T, Saito F, Inazawa J, Oka S, Kawasaki T (октобар 2002). „cDNA cloning, genomic structure and chromosomal mapping of the mouse glucuronyltransferase-S involved in the biosynthesis of the HNK-1 carbohydrate epitope”. Gene. 296 (1–2): 29—36. PMID 12383500. doi:10.1016/S0378-1119(02)00840-5. CS1 одржавање: Формат датума (веза)
- ^ а б „Entrez Gene: B3GAT2 beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)”.
- ^ Bronner-Fraser M (мај 1986). „Analysis of the early stages of trunk neural crest migration in avian embryos using monoclonal antibody HNK-1”. Dev. Biol. 115 (1): 44—55. PMID 3516760. doi:10.1016/0012-1606(86)90226-5. CS1 одржавање: Формат датума (веза)
- ^ Vincent M, Thiery JP (јун 1984). „A cell surface marker for neural crest and placodal cells: further evolution in peripheral and central nervous system”. Dev. Biol. 103 (2): 468—81. PMID 6202575. doi:10.1016/0012-1606(84)90334-8. CS1 одржавање: Формат датума (веза)
Literatura
- Nagase T, Kikuno R, Ohara O (2002). „Prediction of the coding sequences of unidentified human genes. XXII. The complete sequences of 50 new cDNA clones which code for large proteins.”. DNA Res. 8 (6): 319—27. PMID 11853319. doi:10.1093/dnares/8.6.319
. - Strausberg RL, Feingold EA, Grouse LH, et al. (2003). „Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.”. Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899—903. Bibcode:2002PNAS...9916899M. PMC 139241 . PMID 12477932. doi:10.1073/pnas.242603899 .
- Marcos I, Galán JJ, Borrego S, Antiñolo G (2003). „Cloning, characterization, and chromosome mapping of the human GlcAT-S gene.”. J. Hum. Genet. 47 (12): 677—80. PMID 12522689. doi:10.1007/s100380200103 .
- Mungall AJ, Palmer SA, Sims SK, et al. (2003). „The DNA sequence and analysis of human chromosome 6.”. Nature. 425 (6960): 805—11. Bibcode:2003Natur.425..805M. PMID 14574404. doi:10.1038/nature02055 .
- Ota T, Suzuki Y, Nishikawa T, et al. (2004). „Complete sequencing and characterization of 21,243 full-length human cDNAs.”. Nat. Genet. 36 (1): 40—5. PMID 14702039. doi:10.1038/ng1285 .
- Kakuda S, Oka S, Kawasaki T (2004). „Purification and characterization of two recombinant human glucuronyltransferases involved in the biosynthesis of HNK-1 carbohydrate in Escherichia coli.”. Protein Expr. Purif. 35 (1): 111—9. PMID 15039073. doi:10.1016/j.pep.2003.12.021.
- Kakuda S, Sato Y, Tonoyama Y, et al. (2005). „Different acceptor specificities of two glucuronyltransferases involved in the biosynthesis of HNK-1 carbohydrate.”. Glycobiology. 15 (2): 203—10. PMID 15470230. doi:10.1093/glycob/cwi001 .
- Kimura K, Wakamatsu A, Suzuki Y, et al. (2006). „Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes.”. Genome Res. 16 (1): 55—65. PMC 1356129 . PMID 16344560. doi:10.1101/gr.4039406.
- Shiba T, Kakuda S, Ishiguro M, et al. (2006). „Crystal structure of GlcAT-S, a human glucuronyltransferase, involved in the biosynthesis of the HNK-1 carbohydrate epitope.”. Proteins. 65 (2): 499—508. PMID 16897771. S2CID 31290955. doi:10.1002/prot.21118.
Spoljašnje veze
- Human B3GAT2 genome location and B3GAT2 gene details page in the UCSC Genome Browser.
- PDBe-KB provides an overview of all the structure information available in the PDB for Human Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 2 (B3GAT2)
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2.4.1: Heksozil-
transferaze | |
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2.4.2: Pentozil-
transferaze | |
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2.4.99: Sijalil
transferaze | |
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