NCAPH2

Protein-coding gene in the species Homo sapiens
NCAPH2
Identifiers
AliasesNCAPH2, CAPH2, non-SMC condensin II complex subunit H2
External IDsOMIM: 611230; MGI: 1289164; HomoloGene: 12045; GeneCards: NCAPH2; OMA:NCAPH2 - orthologs
Gene location (Human)
Chromosome 22 (human)
Chr.Chromosome 22 (human)[1]
Chromosome 22 (human)
Genomic location for NCAPH2
Genomic location for NCAPH2
Band22q13.33Start50,508,224 bp[1]
End50,524,780 bp[1]
Gene location (Mouse)
Chromosome 15 (mouse)
Chr.Chromosome 15 (mouse)[2]
Chromosome 15 (mouse)
Genomic location for NCAPH2
Genomic location for NCAPH2
Band15 E3|15 44.84 cMStart89,239,922 bp[2]
End89,257,029 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • cerebellar hemisphere

  • right hemisphere of cerebellum

  • right testis

  • left testis

  • ventricular zone

  • vena cava

  • ganglionic eminence

  • anterior pituitary

  • apex of heart

  • right frontal lobe
Top expressed in
  • spermatocyte

  • ventricular zone

  • dentate gyrus of hippocampal formation granule cell

  • lip

  • blastocyst

  • corneal stroma

  • right kidney

  • yolk sac

  • superior frontal gyrus

  • muscle of thigh
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • protein binding
  • chromatin binding
Cellular component
  • membrane
  • chromosome
  • nucleus
  • nucleoplasm
  • cell junction
  • intercellular bridge
  • condensed chromosome
  • condensin complex
Biological process
  • chromosome condensation
  • female meiotic nuclear division
  • meiotic chromosome condensation
  • T cell differentiation in thymus
  • chromosome organization
  • mitotic sister chromatid separation
  • female meiosis chromosome separation
  • mitotic chromosome condensation
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

29781

52683

Ensembl

ENSG00000025770

ENSMUSG00000008690

UniProt

Q6IBW4

Q8BSP2

RefSeq (mRNA)

NM_001185011
NM_014551
NM_152299

NM_001115132
NM_001271600
NM_001271601

RefSeq (protein)

NP_001171940
NP_055366
NP_689512

NP_001108604
NP_001258529
NP_001258530

Location (UCSC)Chr 22: 50.51 – 50.52 MbChr 15: 89.24 – 89.26 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Condensin-2 complex subunit H2, also known as chromosome-associated protein H2 (CAP-H2) or non-SMC condensin II complex subunit H2 (NCAPH2), is a protein that in humans is encoded by the NCAPH2 gene.[5] CAP-H2 is a subunit of condensin II, a large protein complex involved in chromosome condensation.

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000025770 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000008690 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ "Entrez Gene: non-SMC condensin II complex".

Further reading

  • Loftus BJ, Kim UJ, Sneddon VP, et al. (1999). "Genome duplications and other features in 12 Mb of DNA sequence from human chromosome 16p and 16q". Genomics. 60 (3): 295–308. doi:10.1006/geno.1999.5927. PMID 10493829.
  • Ono T, Losada A, Hirano M, et al. (2003). "Differential contributions of condensin I and condensin II to mitotic chromosome architecture in vertebrate cells". Cell. 115 (1): 109–21. doi:10.1016/S0092-8674(03)00724-4. PMID 14532007.
  • Talmud PJ, Drenos F, Shah S, et al. (2009). "Gene-centric association signals for lipids and apolipoproteins identified via the HumanCVD BeadChip". Am. J. Hum. Genet. 85 (5): 628–42. doi:10.1016/j.ajhg.2009.10.014. PMC 2775832. PMID 19913121.
  • Wood AJ, Severson AF, Meyer BJ (2010). "Condensin and cohesin complexity: the expanding repertoire of functions". Nat. Rev. Genet. 11 (6): 391–404. doi:10.1038/nrg2794. PMC 3491780. PMID 20442714.
  • Schleiffer A, Kaitna S, Maurer-Stroh S, et al. (2003). "Kleisins: a superfamily of bacterial and eukaryotic SMC protein partners". Mol. Cell. 11 (3): 571–5. doi:10.1016/S1097-2765(03)00108-4. PMID 12667442.
  • Kamatani Y, Matsuda K, Okada Y, et al. (2010). "Genome-wide association study of hematological and biochemical traits in a Japanese population". Nat. Genet. 42 (3): 210–5. doi:10.1038/ng.531. PMID 20139978. S2CID 30790619.
  • Collins JE, Wright CL, Edwards CA, et al. (2004). "A genome annotation-driven approach to cloning the human ORFeome". Genome Biol. 5 (10): R84. doi:10.1186/gb-2004-5-10-r84. PMC 545604. PMID 15461802.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2002). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Bailey SD, Xie C, Do R, et al. (2010). "Variation at the NFATC2 locus increases the risk of thiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) study". Diabetes Care. 33 (10): 2250–3. doi:10.2337/dc10-0452. PMC 2945168. PMID 20628086.


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