COMMD3-BMI1

Protein-coding gene in humans
COMMD3-BMI1
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

2H0D, 3RPG, 4R8P

Identifiers
AliasesCOMMD3-BMI1, COMMD3-BMI1 readthrough, BMI1, RNF51, PCGF4
External IDsMGI: 88174; HomoloGene: 3797; GeneCards: COMMD3-BMI1; OMA:COMMD3-BMI1 - orthologs
Gene location (Human)
Chromosome 10 (human)
Chr.Chromosome 10 (human)[1]
Chromosome 10 (human)
Genomic location for COMMD3-BMI1
Genomic location for COMMD3-BMI1
Band10p12.2Start22,316,388 bp[1]
End22,329,542 bp[1]
Gene location (Mouse)
Chromosome 2 (mouse)
Chr.Chromosome 2 (mouse)[2]
Chromosome 2 (mouse)
Genomic location for COMMD3-BMI1
Genomic location for COMMD3-BMI1
Band2 A3|2 12.9 cMStart18,681,829 bp[2]
End18,691,440 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • testicle

  • corpus callosum

  • gonad

  • islet of Langerhans

  • bone marrow cells

  • sural nerve

  • stromal cell of endometrium

  • duodenum

  • Achilles tendon

  • tonsil
Top expressed in
  • zygote

  • secondary oocyte

  • plantaris muscle

  • extensor digitorum longus muscle

  • superior surface of tongue

  • primary oocyte

  • medial ganglionic eminence

  • interventricular septum

  • gallbladder

  • neural layer of retina
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • promoter-specific chromatin binding
  • RING-like zinc finger domain binding
  • metal ion binding
  • protein binding
  • zinc ion binding
Cellular component
  • cytoplasm
  • ubiquitin ligase complex
  • nucleoplasm
  • PRC1 complex
  • PcG protein complex
  • nucleus
  • cytosol
  • nuclear body
Biological process
  • regulation of transcription, DNA-templated
  • positive regulation of fibroblast proliferation
  • negative regulation of transcription by RNA polymerase II
  • transcription, DNA-templated
  • segment specification
  • negative regulation of gene expression, epigenetic
  • positive regulation of ubiquitin-protein transferase activity
  • regulation of gene expression
  • histone H2A-K119 monoubiquitination
  • negative regulation of G0 to G1 transition
  • chromatin organization
  • hemopoiesis
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

100532731

12151

Ensembl

ENSG00000269897

ENSMUSG00000026739

UniProt

P35226

P25916

RefSeq (mRNA)

NM_001204062

NM_007552

RefSeq (protein)

NP_001190991
NP_005171

NP_031578

Location (UCSC)Chr 10: 22.32 – 22.33 MbChr 2: 18.68 – 18.69 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

The COMMD3-BMI1 gene in humans encodes the COMMD3-BMI1 readthrough protein. [5]

Function

This locus represents naturally occurring read-through transcription between the neighboring COMM domain-containing protein 3 and polycomb complex protein BMI-1 genes on chromosome 10. The read-through transcript produces a fusion protein that shares sequence identity with each individual gene product.[6]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000269897 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000026739 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ "Entrez Gene: COMMD3-BMI1 readthrough". Retrieved 2013-10-05.
  6. ^ [provided by RefSeq, Feb 2011].

Further reading

This article incorporates text from the United States National Library of Medicine, which is in the public domain.


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