CCNDBP1

Protein-coding gene in the species Homo sapiens
CCNDBP1
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

3AY5

Identifiers
AliasesCCNDBP1, DIP1, GCIP, HHM, cyclin D1 binding protein 1
External IDsOMIM: 607089; MGI: 109595; HomoloGene: 7826; GeneCards: CCNDBP1; OMA:CCNDBP1 - orthologs
Gene location (Human)
Chromosome 15 (human)
Chr.Chromosome 15 (human)[1]
Chromosome 15 (human)
Genomic location for CCNDBP1
Genomic location for CCNDBP1
Band15q15.2Start43,185,118 bp[1]
End43,197,177 bp[1]
Gene location (Mouse)
Chromosome 2 (mouse)
Chr.Chromosome 2 (mouse)[2]
Chromosome 2 (mouse)
Genomic location for CCNDBP1
Genomic location for CCNDBP1
Band2 E5|2 60.37 cMStart120,838,884 bp[2]
End120,847,385 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • trabecular bone

  • mucosa of ileum

  • cardiac muscle tissue of right atrium

  • Achilles tendon

  • bone marrow

  • right uterine tube

  • blood

  • myocardium of left ventricle

  • placenta

  • skin of arm
Top expressed in
  • blood

  • zygote

  • secondary oocyte

  • primary oocyte

  • neural layer of retina

  • granulocyte

  • fetal liver hematopoietic progenitor cell

  • cerebellar cortex

  • cerebellar vermis

  • lobe of cerebellum
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • protein binding
Cellular component
  • nucleus
  • cytoplasm
  • nucleoplasm
Biological process
  • regulation of cell cycle
  • cell cycle
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

23582

17151

Ensembl

ENSG00000166946

ENSMUSG00000023572

UniProt

O95273

Q3TVC7

RefSeq (mRNA)

NM_012142
NM_037370

NM_010761
NM_001355127

RefSeq (protein)

NP_036274

NP_034891
NP_001342056

Location (UCSC)Chr 15: 43.19 – 43.2 MbChr 2: 120.84 – 120.85 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Cyclin-D1-binding protein 1 is a protein that in humans is encoded by the CCNDBP1 gene.[5][6]

This gene was identified by the interaction of its gene product with Grap2, a leukocyte-specific adaptor protein important for immune cell signaling. The protein encoded by this gene was shown to interact with cyclin D. Transfection of this gene in cells was reported to reduce the phosphorylation of Rb gene product by cyclin D-dependent protein kinase, and inhibit E2F1-mediated transcription activity. This protein was also found to interact with helix-loop-helix protein E12 and is thought to be a negative regulator of liver-specific gene expression. Two alternatively spliced variants, which encode distinct isoforms, have been reported.[6]

Interactions

CCNDBP1 has been shown to interact with GRAP2[7] and Cyclin D1.[5]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000166946 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000023572 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ a b Xia C, Bao Z, Tabassam F, Ma W, Qiu M, Hua S, Liu M (Aug 2000). "GCIP, a novel human grap2 and cyclin D interacting protein, regulates E2F-mediated transcriptional activity". J Biol Chem. 275 (27): 20942–8. doi:10.1074/jbc.M002598200. PMID 10801854.
  6. ^ a b "Entrez Gene: CCNDBP1 cyclin D-type binding-protein 1".
  7. ^ Xia C, Bao Z, Tabassam F, Ma W, Qiu M, Hua S, Liu M (Jul 2000). "GCIP, a novel human grap2 and cyclin D interacting protein, regulates E2F-mediated transcriptional activity". J. Biol. Chem. 275 (27). UNITED STATES: 20942–8. doi:10.1074/jbc.M002598200. ISSN 0021-9258. PMID 10801854.

Further reading

  • Ma W, Xia X, Stafford LJ, et al. (2006). "Expression of GCIP in transgenic mice decreases susceptibility to chemical hepatocarcinogenesis". Oncogene. 25 (30): 4207–16. doi:10.1038/sj.onc.1209450. PMID 16501603. S2CID 7442061.
  • Otsuki T, Ota T, Nishikawa T, et al. (2007). "Signal sequence and keyword trap in silico for selection of full-length human cDNAs encoding secretion or membrane proteins from oligo-capped cDNA libraries". DNA Res. 12 (2): 117–26. doi:10.1093/dnares/12.2.117. PMID 16303743.
  • Rual JF, Venkatesan K, Hao T, et al. (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. Bibcode:2005Natur.437.1173R. doi:10.1038/nature04209. PMID 16189514. S2CID 4427026.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Chang MS, Chen CY, Yeh HI, et al. (2003). "Cloning, expression, and genomic organization of mouse mp29 gene". Biochem. Biophys. Res. Commun. 299 (2): 241–6. doi:10.1016/S0006-291X(02)02605-0. PMID 12437976.
  • Dgany O, Avidan N, Delaunay J, et al. (2003). "Congenital Dyserythropoietic Anemia Type I Is Caused by Mutations in Codanin-1". Am. J. Hum. Genet. 71 (6): 1467–74. doi:10.1086/344781. PMC 378595. PMID 12434312.
  • Terai S, Aoki H, Ashida K, Thorgeirsson SS (2000). "Human homologue of maid: A dominant inhibitory helix-loop-helix protein associated with liver-specific gene expression". Hepatology. 32 (2): 357–66. doi:10.1053/jhep.2000.9092. PMID 10915743. S2CID 33459194.
  • Yamada S, Iida T, Tabata T, et al. (2000). "Alcoholic fatty liver differentially induces a neutrophil-chemokine and hepatic necrosis after ischemia-reperfusion in rat". Hepatology. 32 (2): 278–88. doi:10.1053/jhep.2000.9604. PMID 10915734.
  • Yao Y, Doki Y, Jiang W, et al. (2000). "Cloning and characterization of DIP1, a novel protein that is related to the Id family of proteins". Exp. Cell Res. 257 (1): 22–32. doi:10.1006/excr.2000.4884. PMID 10854051.
  • Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, et al. (1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–56. doi:10.1016/S0378-1119(97)00411-3. PMID 9373149.
  • Maruyama K, Sugano S (1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–4. doi:10.1016/0378-1119(94)90802-8. PMID 8125298.


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