ATP6V1C2

Protein-coding gene in the species Homo sapiens
ATP6V1C2
Identifiers
AliasesATP6V1C2, ATP6C2, VMA5, ATPase H+ transporting V1 subunit C2
External IDsOMIM: 618070; MGI: 1916025; HomoloGene: 15866; GeneCards: ATP6V1C2; OMA:ATP6V1C2 - orthologs
Gene location (Human)
Chromosome 2 (human)
Chr.Chromosome 2 (human)[1]
Chromosome 2 (human)
Genomic location for ATP6V1C2
Genomic location for ATP6V1C2
Band2p25.1Start10,721,100 bp[1]
End10,785,110 bp[1]
Gene location (Mouse)
Chromosome 12 (mouse)
Chr.Chromosome 12 (mouse)[2]
Chromosome 12 (mouse)
Genomic location for ATP6V1C2
Genomic location for ATP6V1C2
Band12|12 A1.1Start17,334,722 bp[2]
End17,379,360 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • skin of abdomen

  • skin of leg

  • secondary oocyte

  • minor salivary glands

  • anterior pituitary

  • human kidney

  • olfactory zone of nasal mucosa

  • skin of thigh

  • parotid gland

  • placenta
Top expressed in
  • lip

  • esophagus

  • skin of external ear

  • olfactory epithelium

  • left lung

  • right kidney

  • left lung lobe

  • right lung

  • right lung lobe

  • skin of back
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • protein binding
  • protein dimerization activity
  • proton transmembrane transporter activity
  • P-type proton-exporting transporter activity
  • proton-transporting ATPase activity, rotational mechanism
Cellular component
  • proton-transporting V-type ATPase, V1 domain
  • lysosomal membrane
  • cytosol
  • extracellular exosome
  • vacuolar proton-transporting V-type ATPase, V1 domain
Biological process
  • positive regulation of Wnt signaling pathway
  • insulin receptor signaling pathway
  • ion transmembrane transport
  • ion transport
  • transferrin transport
  • regulation of macroautophagy
  • phagosome acidification
  • transport
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

245973

68775

Ensembl

ENSG00000143882

ENSMUSG00000020566

UniProt

Q8NEY4

Q99L60

RefSeq (mRNA)

NM_001039362
NM_144583

NM_001159632
NM_133699

RefSeq (protein)

NP_001034451
NP_653184

NP_001153104
NP_598460

Location (UCSC)Chr 2: 10.72 – 10.79 MbChr 12: 17.33 – 17.38 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

V-type proton ATPase subunit C 2 is an enzyme that in humans is encoded by the ATP6V1C2 gene.[5][6]

This gene encodes a component of vacuolar ATPase (V-ATPase), a multisubunit enzyme that mediates acidification of eukaryotic intracellular organelles. V-ATPase dependent organelle acidification is necessary for such intracellular processes as protein sorting, zymogen activation, receptor-mediated endocytosis, and synaptic vesicle proton gradient generation.

V-ATPase is composed of a cytosolic V1 domain and a transmembrane V0 domain. The V1 domain consists of three A, three B, and two G subunits, as well as a C, D, E, F, and H subunit. The V1 domain contains the ATP catalytic site. This gene encodes alternate transcriptional splice variants, encoding different V1 domain C subunit isoforms.[6]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000143882 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000020566 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Smith AN, Borthwick KJ, Karet FE (Oct 2002). "Molecular cloning and characterization of novel tissue-specific isoforms of the human vacuolar H(+)-ATPase C, G and d subunits, and their evaluation in autosomal recessive distal renal tubular acidosis". Gene. 297 (1–2): 169–77. doi:10.1016/S0378-1119(02)00884-3. PMID 12384298.
  6. ^ a b "Entrez Gene: ATP6V1C2 ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2".


  • v
  • t
  • e